Bio::Phylo::Util::CONSTANT::Int - Integer constants, no serviceable parts inside River stage two • 9 direct dependents • 16 total dependents

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Taxa - Container of taxon objects River stage two • 9 direct dependents • 16 total dependents

The Bio::Phylo::Taxa object models a set of operational taxonomic units. The object subclasses the Bio::Phylo::Listable object, and so the filtering methods of that class are available. A taxa object can link to multiple forest and matrix objects....

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Identifiable - Objects with unique identifiers River stage two • 9 direct dependents • 16 total dependents

This is the base class for objects in the Bio::Phylo package that need unique identifiers....

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Matrices::Datum - Character state sequence River stage two • 9 direct dependents • 16 total dependents

The datum object models a single observation or a sequence of observations, which can be linked to a taxon object. This package contains the getters and setters that alter the internal state of the datum object. Additional (stateless) behaviours are ...

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Forest::NodeRole - Extra behaviours for a node in a phylogenetic tree River stage two • 9 direct dependents • 16 total dependents

This module defines a node object and its methods. The node is fairly syntactically rich in terms of navigation, and additional getters are provided to further ease navigation from node to node. Typical first daughter -> next sister traversal and rec...

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Forest::TreeRole - Extra behaviours for a phylogenetic tree River stage two • 9 direct dependents • 16 total dependents

The object models a phylogenetic tree, a container of Bio::Phylo::Forest::Node objects. The tree object inherits from Bio::Phylo::Listable, so look there for more methods....

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Matrices::DatumRole - Extra behaviours for a character state sequence River stage two • 9 direct dependents • 16 total dependents

The datum object models a single observation or a sequence of observations, which can be linked to a taxon object....

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

Bio::Phylo::Matrices::MatrixRole - Extra behaviours for a character state matrix River stage two • 9 direct dependents • 16 total dependents

This module defines a container object that holds Bio::Phylo::Matrices::Datum objects. The matrix object inherits from Bio::Phylo::Listable, so the methods defined there apply here....

RVOSA/Bio-Phylo-v2.0.1 - 30 Oct 2017 19:50:35 UTC

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