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CJFIELDS / BioPerl-1.007000_004 / t / data / genewise_output.paracel_btk 

            

              
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GeneWise BTK 5.1.3-88/88 2002-08-09 (Fdf Client 1.500)
Copyright 2001 Paracel, Inc
Query=   protein sequence #1
        (10 letters)
Database:  /fdf/gm2build24/gm0/0//bwb/tmp/XrhARf0Sal.codon
           2 sequences; 64 total letters.
Searching.......................................................done.
WARNING:  No calibration or zscore calculation was done.
          Statistical information may not be valid.
                                                                        E
Sequences producing significant alignments:                    Score  Value
DNA sequence #1                                                   26  0.0
reverse-complement of DNA sequence #1                             26  0.0
>DNA sequence #1
          Length = 30
           
 Score = 26.4 bits (26), Expect = 0.0
 Identities = 10/10 (100%), Positives = 10/10 (100%)
Query: 1  SWPLSEALMR 10
          SWPLSEALMR
Sbjct: 1  SWPLSEALMR 28
>reverse-complement of DNA sequence #1
          Length = 30
           
 Score = 26.4 bits (26), Expect = 0.0
 Identities = 10/10 (100%), Positives = 10/10 (100%)
Query: 1  SWPLSEALMR 10
          SWPLSEALMR
Sbjct: 30 SWPLSEALMR 3
Histogram of all scores:
  score    obs    exp  (one '=' represents 1 hits)
  -----    ---    ---
<     6      2      - |==
      6      0      - |
      7      0      - |
      8      0      - |
      9      0      - |
     10      0      - |
     11      0      - |
     12      0      - |
     13      0      - |
     14      0      - |
     15      0      - |
     16      0      - |
     17      0      - |
     18      0      - |
     19      0      - |
     20      0      - |
     21      0      - |
     22      0      - |
     23      0      - |
     24      0      - |
     25      0      - |
>=   26      2      - |==
unknown(8) BTK 5.1.3-88/88 2002-08-09 (Fdf Client 1.500)
Copyright 2001 Paracel, Inc
Query=   protein sequence #2
        (9 letters)
Database:  /fdf/gm2build24/gm0/0//bwb/tmp/XrhARf0Sal.codon
           2 sequences; 64 total letters.
Searching.......................................................done.
WARNING:  No calibration or zscore calculation was done.
          Statistical information may not be valid.
                                                                        E
Sequences producing significant alignments:                    Score  Value
DNA sequence #1                                                   24  0.0
reverse-complement of DNA sequence #1                             24  0.0
>DNA sequence #1
          Length = 30
           
 Score = 23.8 bits (24), Expect = 0.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 1  SWPLSEALM 9
          SWPLSEALM
Sbjct: 1  SWPLSEALM 25
>reverse-complement of DNA sequence #1
          Length = 30
           
 Score = 23.8 bits (24), Expect = 0.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 1  SWPLSEALM 9
          SWPLSEALM
Sbjct: 30 SWPLSEALM 6
Histogram of all scores:
  score    obs    exp  (one '=' represents 1 hits)
  -----    ---    ---
<     5      2      - |==
      5      0      - |
      6      0      - |
      7      0      - |
      8      0      - |
      9      0      - |
     10      0      - |
     11      0      - |
     12      0      - |
     13      0      - |
     14      0      - |
     15      0      - |
     16      0      - |
     17      0      - |
     18      0      - |
     19      0      - |
     20      0      - |
     21      0      - |
     22      0      - |
>=   23      2      - |==
unknown(8) BTK 5.1.3-88/88 2002-08-09 (Fdf Client 1.500)
Copyright 2001 Paracel, Inc
Query=   protein sequence #3
        (8 letters)
Database:  /fdf/gm2build24/gm0/0//bwb/tmp/XrhARf0Sal.codon
           2 sequences; 64 total letters.
Searching.......................................................done.
WARNING:  No calibration or zscore calculation was done.
          Statistical information may not be valid.
                                                                        E
Sequences producing significant alignments:                    Score  Value
DNA sequence #1                                                   21  0.0
reverse-complement of DNA sequence #1                             21  0.0
>DNA sequence #1
          Length = 30
           
 Score = 21.1 bits (21), Expect = 0.0
 Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 1  SWPLSEAL 8
          SWPLSEAL
Sbjct: 1  SWPLSEAL 22
>reverse-complement of DNA sequence #1
          Length = 30
           
 Score = 21.1 bits (21), Expect = 0.0
 Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 1  SWPLSEAL 8
          SWPLSEAL
Sbjct: 30 SWPLSEAL 9
Histogram of all scores:
  score    obs    exp  (one '=' represents 1 hits)
  -----    ---    ---
<     5      2      - |==
      5      0      - |
      6      0      - |
      7      0      - |
      8      0      - |
      9      0      - |
     10      0      - |
     11      0      - |
     12      0      - |
     13      0      - |
     14      0      - |
     15      0      - |
     16      0      - |
     17      0      - |
     18      0      - |
     19      0      - |
>=   20      2      - |==