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"label" : "Male"
},
"treatments" : [
{
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"field" : "DrugName",
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"value" : "Lisinopril"
},
"ageAtOnset" : {
"age" : {
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}
},
"cumulativeDose" : {
"unit" : {
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"label" : "Week"
},
"value" : 22
},
"doseIntervals" : [
{
"interval" : {
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"start" : "1900-01-01T00:00:00Z"
},
"quantity" : {
"referenceRange" : {
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"low" : -1,
"unit" : {
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"label" : "Not Available"
}
},
"unit" : {
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"label" : "Milligram"
},
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},
"scheduleFrequency" : {
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"label" : "Not Available"
}
}
],
"routeOfAdministration" : {
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"label" : "Oral Route of Administration"
},
"treatmentCode" : {
"id" : "NCIT:C29159",
"label" : "Lisinopril"
}
}
]
},
{
"diseases" : [
{
"ageOfOnset" : {
"age" : {
"iso8601duration" : "P999Y"
}
},
"diseaseCode" : {
"id" : "NCIT:C28397",
"label" : "Asthma"
},
"severity" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
},
"stage" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
}
},
{
"ageOfOnset" : {
"age" : {
"iso8601duration" : "P999Y"
}
},
"diseaseCode" : {
"id" : "NCIT:C2985",
"label" : "Diabetes Mellitus"
},
"severity" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
},
"stage" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
}
},
{
"ageOfOnset" : {
"age" : {
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}
},
"diseaseCode" : {
"id" : "NCIT:C3117",
"label" : "Hypertension"
},
"severity" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
},
"stage" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
}
}
],
"ethnicity" : {
"id" : "NCIT:C41261",
"label" : "White"
},
"exposures" : [
{
"_info" : "AlcoholUse",
"ageAtExposure" : {
"age" : {
"iso8601duration" : "P28Y"
}
},
"date" : "1900-01-01",
"duration" : "P999Y",
"exposureCode" : {
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"label" : "Alcohol"
},
"unit" : {
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"label" : "Yes"
},
"value" : -1
}
],
"id" : "P010:Treatment",
"info" : {
"CSV_columns" : {
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"AgeAtTobaccoExposure" : null,
"AlcoholUse" : "Yes",
"BMI (kg/m^2)" : 20.5,
"Disease_1" : "Asthma",
"Disease_2" : "Diabetes",
"Disease_3" : "Hypertension",
"DrugDose (mg)" : 50,
"DrugName" : "Lisinopril",
"Ethnicity" : "Caucasian",
"EventName" : "Treatment",
"Hemoglobin (g/dL)" : 15.3,
"PatientID" : "P010",
"PhenotypicFeature_1" : "Emphysema",
"PhenotypicFeature_2" : "Abnormal heart valve morphology",
"Platelets (10^9/L)" : 390,
"Sex" : "Male",
"TobaccoUse" : "No",
"TreatmentDuration (weeks)" : 22,
"WBC (10^9/L)" : 6.7
},
"project" : {
"description" : "Mapping file for a CSV with generic clinical data",
"id" : "CSV_src_test",
"ontology" : "ncit",
"source" : "csv",
"version" : "test-0.1"
}
},
"measures" : [
{
"assayCode" : {
"id" : "NCIT:C64848",
"label" : "Hemoglobin Measurement"
},
"date" : "1900-01-01",
"measurementValue" : {
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"low" : 12.1,
"unit" : {
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}
},
"unit" : {
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},
"value" : 15.3
}
},
"procedure" : {
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"label" : "Blood Test Result"
}
}
},
{
"assayCode" : {
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"label" : "Leukocyte"
},
"date" : "1900-01-01",
"measurementValue" : {
"quantity" : {
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"unit" : {
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}
},
"unit" : {
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},
"value" : 6.7
}
},
"procedure" : {
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"label" : "Blood Test Result"
}
}
},
{
"assayCode" : {
"id" : "NCIT:C51951",
"label" : "Platelet Count"
},
"date" : "1900-01-01",
"measurementValue" : {
"quantity" : {
"referenceRange" : {
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"low" : 150,
"unit" : {
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"label" : "Cells per Microliter"
}
},
"unit" : {
"id" : "NCIT:C67242",
"label" : "Cells per Microliter"
},
"value" : 390
}
},
"procedure" : {
"procedureCode" : {
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"label" : "Blood Test Result"
}
}
},
{
"assayCode" : {
"id" : "NCIT:C16358",
"label" : "Body Mass Index"
},
"date" : "1900-01-01",
"measurementValue" : {
"quantity" : {
"referenceRange" : {
"high" : 24.9,
"low" : 18.5,
"unit" : {
"id" : "NCIT:C49671",
"label" : "Kilogram per Square Meter"
}
},
"unit" : {
"id" : "NCIT:C49671",
"label" : "Kilogram per Square Meter"
},
"value" : 20.5
}
},
"procedure" : {
"procedureCode" : {
"id" : "NCIT:C83341",
"label" : "Physical Examination Category"
}
}
}
],
"phenotypicFeatures" : [
{
"excluded" : false,
"excluded_ori" : "Emphysema",
"featureType" : {
"id" : "HP:0002097",
"label" : "Emphysema"
}
},
{
"excluded" : false,
"excluded_ori" : "Abnormal heart valve morphology",
"featureType" : {
"id" : "HP:0001654",
"label" : "Abnormal heart valve morphology"
}
}
],
"sex" : {
"id" : "NCIT:C20197",
"label" : "Male"
},
"treatments" : [
{
"_info" : {
"drug_name" : "Lisinopril",
"field" : "DrugName",
"route" : "oral",
"value" : "Lisinopril"
},
"ageAtOnset" : {
"age" : {
"iso8601duration" : "P999Y"
}
},
"cumulativeDose" : {
"unit" : {
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"label" : "Week"
},
"value" : 22
},
"doseIntervals" : [
{
"interval" : {
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"start" : "1900-01-01T00:00:00Z"
},
"quantity" : {
"referenceRange" : {
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"low" : -1,
"unit" : {
"id" : "NCIT:C126101",
"label" : "Not Available"
}
},
"unit" : {
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"label" : "Milligram"
},
"value" : 22
},
"scheduleFrequency" : {
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"label" : "Not Available"
}
}
],
"routeOfAdministration" : {
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"label" : "Oral Route of Administration"
},
"treatmentCode" : {
"id" : "NCIT:C29159",
"label" : "Lisinopril"
}
}
]
}
]