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"1900-01-01T00:00:00Z"
,
"start"
:
"1900-01-01T00:00:00Z"
},
"quantity"
: {
"referenceRange"
: {
"high"
: -1,
"low"
: -1,
"unit"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
},
"unit"
: {
"id"
:
"NCIT:C28253"
,
"label"
:
"Milligram"
},
"value"
: 22
},
"scheduleFrequency"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
}
],
"routeOfAdministration"
: {
"id"
:
"NCIT:C38288"
,
"label"
:
"Oral Route of Administration"
},
"treatmentCode"
: {
"id"
:
"NCIT:C29159"
,
"label"
:
"Lisinopril"
}
}
]
},
{
"diseases"
: [
{
"ageOfOnset"
: {
"age"
: {
"iso8601duration"
:
"P999Y"
}
},
"diseaseCode"
: {
"id"
:
"NCIT:C28397"
,
"label"
:
"Asthma"
},
"severity"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
},
"stage"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
},
{
"ageOfOnset"
: {
"age"
: {
"iso8601duration"
:
"P999Y"
}
},
"diseaseCode"
: {
"id"
:
"NCIT:C2985"
,
"label"
:
"Diabetes Mellitus"
},
"severity"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
},
"stage"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
},
{
"ageOfOnset"
: {
"age"
: {
"iso8601duration"
:
"P999Y"
}
},
"diseaseCode"
: {
"id"
:
"NCIT:C3117"
,
"label"
:
"Hypertension"
},
"severity"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
},
"stage"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
}
],
"ethnicity"
: {
"id"
:
"NCIT:C41261"
,
"label"
:
"White"
},
"exposures"
: [
{
"_info"
:
"AlcoholUse"
,
"ageAtExposure"
: {
"age"
: {
"iso8601duration"
:
"P28Y"
}
},
"date"
:
"1900-01-01"
,
"duration"
:
"P999Y"
,
"exposureCode"
: {
"id"
:
"NCIT:C2190"
,
"label"
:
"Alcohol"
},
"unit"
: {
"id"
:
"NCIT:C49488"
,
"label"
:
"Yes"
},
"value"
: -1
}
],
"id"
:
"P010:Treatment"
,
"info"
: {
"CSV_columns"
: {
"AgeAtAlcoholExposure"
: 28,
"AgeAtTobaccoExposure"
:
null
,
"AlcoholUse"
:
"Yes"
,
"BMI (kg/m^2)"
: 20.5,
"Disease_1"
:
"Asthma"
,
"Disease_2"
:
"Diabetes"
,
"Disease_3"
:
"Hypertension"
,
"DrugDose (mg)"
: 50,
"DrugName"
:
"Lisinopril"
,
"Ethnicity"
:
"Caucasian"
,
"EventName"
:
"Treatment"
,
"Hemoglobin (g/dL)"
: 15.3,
"PatientID"
:
"P010"
,
"PhenotypicFeature_1"
:
"Emphysema"
,
"PhenotypicFeature_2"
:
"Abnormal heart valve morphology"
,
"Platelets (10^9/L)"
: 390,
"Sex"
:
"Male"
,
"TobaccoUse"
:
"No"
,
"TreatmentDuration (weeks)"
: 22,
"WBC (10^9/L)"
: 6.7
},
"project"
: {
"description"
:
"Mapping file for a CSV with generic clinical data"
,
"id"
:
"CSV_src_test"
,
"ontology"
:
"ncit"
,
"source"
:
"csv"
,
"version"
:
"test-0.1"
}
},
"measures"
: [
{
"assayCode"
: {
"id"
:
"NCIT:C64848"
,
"label"
:
"Hemoglobin Measurement"
},
"date"
:
"1900-01-01"
,
"measurementValue"
: {
"quantity"
: {
"referenceRange"
: {
"high"
: 17.2,
"low"
: 12.1,
"unit"
: {
"id"
:
"NCIT:C64783"
,
"label"
:
"Gram per Deciliter"
}
},
"unit"
: {
"id"
:
"NCIT:C64783"
,
"label"
:
"Gram per Deciliter"
},
"value"
: 15.3
}
},
"procedure"
: {
"procedureCode"
: {
"id"
:
"NCIT:C27232"
,
"label"
:
"Blood Test Result"
}
}
},
{
"assayCode"
: {
"id"
:
"NCIT:C12529"
,
"label"
:
"Leukocyte"
},
"date"
:
"1900-01-01"
,
"measurementValue"
: {
"quantity"
: {
"referenceRange"
: {
"high"
: 11,
"low"
: 4,
"unit"
: {
"id"
:
"NCIT:C67242"
,
"label"
:
"Cells per Microliter"
}
},
"unit"
: {
"id"
:
"NCIT:C67242"
,
"label"
:
"Cells per Microliter"
},
"value"
: 6.7
}
},
"procedure"
: {
"procedureCode"
: {
"id"
:
"NCIT:C27232"
,
"label"
:
"Blood Test Result"
}
}
},
{
"assayCode"
: {
"id"
:
"NCIT:C51951"
,
"label"
:
"Platelet Count"
},
"date"
:
"1900-01-01"
,
"measurementValue"
: {
"quantity"
: {
"referenceRange"
: {
"high"
: 450,
"low"
: 150,
"unit"
: {
"id"
:
"NCIT:C67242"
,
"label"
:
"Cells per Microliter"
}
},
"unit"
: {
"id"
:
"NCIT:C67242"
,
"label"
:
"Cells per Microliter"
},
"value"
: 390
}
},
"procedure"
: {
"procedureCode"
: {
"id"
:
"NCIT:C27232"
,
"label"
:
"Blood Test Result"
}
}
},
{
"assayCode"
: {
"id"
:
"NCIT:C16358"
,
"label"
:
"Body Mass Index"
},
"date"
:
"1900-01-01"
,
"measurementValue"
: {
"quantity"
: {
"referenceRange"
: {
"high"
: 24.9,
"low"
: 18.5,
"unit"
: {
"id"
:
"NCIT:C49671"
,
"label"
:
"Kilogram per Square Meter"
}
},
"unit"
: {
"id"
:
"NCIT:C49671"
,
"label"
:
"Kilogram per Square Meter"
},
"value"
: 20.5
}
},
"procedure"
: {
"procedureCode"
: {
"id"
:
"NCIT:C83341"
,
"label"
:
"Physical Examination Category"
}
}
}
],
"phenotypicFeatures"
: [
{
"excluded"
:
false
,
"excluded_ori"
:
"Emphysema"
,
"featureType"
: {
"id"
:
"HP:0002097"
,
"label"
:
"Emphysema"
}
},
{
"excluded"
:
false
,
"excluded_ori"
:
"Abnormal heart valve morphology"
,
"featureType"
: {
"id"
:
"HP:0001654"
,
"label"
:
"Abnormal heart valve morphology"
}
}
],
"sex"
: {
"id"
:
"NCIT:C20197"
,
"label"
:
"Male"
},
"treatments"
: [
{
"_info"
: {
"drug_name"
:
"Lisinopril"
,
"field"
:
"DrugName"
,
"route"
:
"oral"
,
"value"
:
"Lisinopril"
},
"ageAtOnset"
: {
"age"
: {
"iso8601duration"
:
"P999Y"
}
},
"cumulativeDose"
: {
"unit"
: {
"id"
:
"NCIT:C29844"
,
"label"
:
"Week"
},
"value"
: 22
},
"doseIntervals"
: [
{
"interval"
: {
"end"
:
"1900-01-01T00:00:00Z"
,
"start"
:
"1900-01-01T00:00:00Z"
},
"quantity"
: {
"referenceRange"
: {
"high"
: -1,
"low"
: -1,
"unit"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
},
"unit"
: {
"id"
:
"NCIT:C28253"
,
"label"
:
"Milligram"
},
"value"
: 22
},
"scheduleFrequency"
: {
"id"
:
"NCIT:C126101"
,
"label"
:
"Not Available"
}
}
],
"routeOfAdministration"
: {
"id"
:
"NCIT:C38288"
,
"label"
:
"Oral Route of Administration"
},
"treatmentCode"
: {
"id"
:
"NCIT:C29159"
,
"label"
:
"Lisinopril"
}
}
]
}
]