——————BEGIN {
$Bio::Chado::Schema::Result::Companalysis::Analysis::AUTHORITY
=
'cpan:RBUELS'
;
}
{
$Bio::Chado::Schema::Result::Companalysis::Analysis::VERSION
=
'0.20000'
;
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use
strict;
use
warnings;
=head1 NAME
Bio::Chado::Schema::Result::Companalysis::Analysis
=head1 DESCRIPTION
An analysis is a particular type of a
computational analysis; it may be a blast of one sequence against
another, or an all by all blast, or a different kind of analysis
altogether. It is a single unit of computation.
=cut
__PACKAGE__->table(
"analysis"
);
=head1 ACCESSORS
=head2 analysis_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'analysis_analysis_id_seq'
=head2 name
data_type: 'varchar'
is_nullable: 1
size: 255
A way of grouping analyses. This
should be a handy short identifier that can help people find an
analysis they want. For instance "tRNAscan", "cDNA", "FlyPep",
"SwissProt", and it should not be assumed to be unique. For instance, there may be lots of separate analyses done against a cDNA database.
=head2 description
data_type: 'text'
is_nullable: 1
=head2 program
data_type: 'varchar'
is_nullable: 0
size: 255
Program name, e.g. blastx, blastp, sim4, genscan.
=head2 programversion
data_type: 'varchar'
is_nullable: 0
size: 255
Version description, e.g. TBLASTX 2.0MP-WashU [09-Nov-2000].
=head2 algorithm
data_type: 'varchar'
is_nullable: 1
size: 255
Algorithm name, e.g. blast.
=head2 sourcename
data_type: 'varchar'
is_nullable: 1
size: 255
Source name, e.g. cDNA, SwissProt.
=head2 sourceversion
data_type: 'varchar'
is_nullable: 1
size: 255
=head2 sourceuri
data_type: 'text'
is_nullable: 1
This is an optional, permanent URL or URI for the source of the analysis. The idea is that someone could recreate the analysis directly by going to this URI and fetching the source data (e.g. the blast database, or the training model).
=head2 timeexecuted
data_type: 'timestamp'
default_value: current_timestamp
is_nullable: 0
original: {default_value => \"now()"}
=cut
__PACKAGE__->add_columns(
"analysis_id"
,
{
data_type
=>
"integer"
,
is_auto_increment
=> 1,
is_nullable
=> 0,
sequence
=>
"analysis_analysis_id_seq"
,
},
"name"
,
{
data_type
=>
"varchar"
,
is_nullable
=> 1,
size
=> 255 },
"description"
,
{
data_type
=>
"text"
,
is_nullable
=> 1 },
"program"
,
{
data_type
=>
"varchar"
,
is_nullable
=> 0,
size
=> 255 },
"programversion"
,
{
data_type
=>
"varchar"
,
is_nullable
=> 0,
size
=> 255 },
"algorithm"
,
{
data_type
=>
"varchar"
,
is_nullable
=> 1,
size
=> 255 },
"sourcename"
,
{
data_type
=>
"varchar"
,
is_nullable
=> 1,
size
=> 255 },
"sourceversion"
,
{
data_type
=>
"varchar"
,
is_nullable
=> 1,
size
=> 255 },
"sourceuri"
,
{
data_type
=>
"text"
,
is_nullable
=> 1 },
"timeexecuted"
,
{
data_type
=>
"timestamp"
,
default_value
=> \
"current_timestamp"
,
is_nullable
=> 0,
original
=> {
default_value
=> \
"now()"
},
},
);
__PACKAGE__->set_primary_key(
"analysis_id"
);
__PACKAGE__->add_unique_constraint(
"analysis_c1"
, [
"program"
,
"programversion"
,
"sourcename"
]);
=head1 RELATIONS
=head2 analysisfeatures
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Companalysis::Analysisfeature>
=cut
__PACKAGE__->has_many(
"analysisfeatures"
,
"Bio::Chado::Schema::Result::Companalysis::Analysisfeature"
,
{
"foreign.analysis_id"
=>
"self.analysis_id"
},
{
cascade_copy
=> 0,
cascade_delete
=> 0 },
);
=head2 analysisprops
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Companalysis::Analysisprop>
=cut
__PACKAGE__->has_many(
"analysisprops"
,
"Bio::Chado::Schema::Result::Companalysis::Analysisprop"
,
{
"foreign.analysis_id"
=>
"self.analysis_id"
},
{
cascade_copy
=> 0,
cascade_delete
=> 0 },
);
=head2 phylotrees
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Phylogeny::Phylotree>
=cut
__PACKAGE__->has_many(
"phylotrees"
,
"Bio::Chado::Schema::Result::Phylogeny::Phylotree"
,
{
"foreign.analysis_id"
=>
"self.analysis_id"
},
{
cascade_copy
=> 0,
cascade_delete
=> 0 },
);
=head2 quantifications
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Quantification>
=cut
__PACKAGE__->has_many(
"quantifications"
,
"Bio::Chado::Schema::Result::Mage::Quantification"
,
{
"foreign.analysis_id"
=>
"self.analysis_id"
},
{
cascade_copy
=> 0,
cascade_delete
=> 0 },
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:XYC5XhRez+x6ytnUB7nVOw
# You can replace this text with custom content, and it will be preserved on regeneration
1;