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SENDU / bioperl-1.5.2_004-RC / t / data / bl2seq.blastn 

            

              
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Query= 
         (180 letters)
>human
          Length = 179
 Score = 54.0 bits (27), Expect = 2e-12
 Identities = 83/94 (88%), Gaps = 7/94 (7%)
 Strand = Plus / Plus
                                                                        
Query: 94  gtggctgggctc-tgaagcatttggg--tgagcccagggg-ctcagggcagggcacct-g 148
           |||||||||||| |||||||| ||||  |||||||||||| | || |||||||||||| |
Sbjct: 86  gtggctgggctcgtgaagcatgtgggggtgagcccaggggccccaaggcagggcacctgg 145
                                              
Query: 149 ccttcag-cggcctcag-cctgcctgtctcccag 180
           ||||||| | ||||||| ||||||||||||||||
Sbjct: 146 ccttcagcctgcctcagccctgcctgtctcccag 179
 Score = 36.2 bits (18), Expect = 4e-07
 Identities = 18/18 (100%)
 Strand = Plus / Plus
                             
Query: 1  gtctgttccaagggcctt 18
          ||||||||||||||||||
Sbjct: 1  gtctgttccaagggcctt 18
Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7
Number of Sequences: 0
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
length of query: 180
length of database: 179
effective HSP length: 6
effective length of query: 174
effective length of database: 173
effective search space:    30102
effective search space used:    30102
T: 0
A: 30
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 6 (12.4 bits)