—{
$Test::Chado::FixtureManager::Flatfile::VERSION
=
'v4.1.1'
;
# TRIAL
}
use
Moo;
use
MooX::late;
use
Carp;
use
Test::Chado;
has
'default_fixture_path'
=> (
is
=>
'ro'
,
isa
=> Str,
lazy
=> 1,
default
=>
sub
{
return
catfile( module_dir(
'Test::Chado'
) ) }
);
has
'fixture_path'
=> (
is
=>
'rw'
,
isa
=> Str,
lazy
=> 1,
default
=>
sub
{
my
$self
=
shift
;
return
$self
->default_fixture_path;
}
);
has
'organism_fixture'
=> (
is
=>
'rw'
,
isa
=> Str,
lazy
=> 1,
default
=>
sub
{
my
$self
=
shift
;
return
catfile(
$self
->default_fixture_path,
'organism.yaml'
);
}
);
has
'rel_fixture'
=> (
is
=>
'rw'
,
isa
=> Str,
lazy
=> 1,
default
=>
sub
{
my
$self
=
shift
;
return
catfile(
$self
->default_fixture_path,
'relationship.obo_xml'
);
}
);
has
'so_fixture'
=> (
is
=>
'rw'
,
isa
=> Str,
lazy
=> 1,
default
=>
sub
{
my
$self
=
shift
;
return
catfile(
$self
->default_fixture_path,
'sofa.obo_xml'
);
}
);
1;
__END__
=pod
=head1 NAME
Test::Chado::FixtureManager::Flatfile
=head1 VERSION
version v4.1.1
=head1 DESCRIPTION
Manages the filesystem location of various test fixtures that comes bundled with this distribution
=head1 API
=head2 Attributes
=over
=item default_fixture_path [ro]
Base folder of all fixutres
=item fixture_path [rw]
To set a custom base path of all fixtures. By default, it returns the L<default_fixture_path>
=item organism_fixture [rw]
Get/Set attribute for organism fixture file, default is B<organism.yaml>
=item rel_fixture [rw]
Get/Set attribute for relationship ontology file in xml format, default is B<relationship.obo_xml>
=item so_fixture [rw]
Get/Set attribute for sequence ontology file in xml format, default is B<sofa.obo_xml>
=back
=head1 AUTHOR
Siddhartha Basu <biosidd@gmail.com>
=head1 COPYRIGHT AND LICENSE
This software is copyright (c) 2011 by Siddhartha Basu.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
=cut