NAME
Bio::DB::SQL::SeqLocationAdaptor - An adaptor for retrieving sequence locations for a db.
SYNOPSIS
Give standard usage here
DESCRIPTION
Describe the object here
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@bio.perl.org
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via email or the web:
bioperl-bugs@bio.perl.org
http://bio.perl.org/bioperl-bugs/
AUTHOR - Ewan Birney
Email birney@ebi.ac.uk
Describe contact details here
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
fetch_by_dbID
Title : fetch_by_dbID
Usage :
Function:
Example :
Returns :
Args :
store
Title : store
Usage :
Function:
Example :
Returns :
Args :
_store_component
Title : _store_component
Usage :
Function:
Example :
Returns :
Args :
remove_by_dbID
Title : remove_by_dbID
Usage :
Function:
Example :
Returns :
Args :
_clean_orphans
Title : _clean_orphans
Usage :
Function: Checks the remote_seqfeature_name table for entries that are not linked to any record in seqfeature_location and deletes such entries.
Example :
Returns : number of records deleted
Args : none