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 / 
bioperl-db-0.1
/ Bio::DB::Seq

NAME

Bio::DB::Seq - DESCRIPTION of Object

SYNOPSIS

Give standard usage here

DESCRIPTION

Describe the object here

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.

  bioperl-l@bio.perl.org

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via email or the web:

  bioperl-bugs@bio.perl.org
  http://bio.perl.org/bioperl-bugs/

AUTHOR - Ewan Birney

Email birney@ebi.ac.uk

Describe contact details here

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

primary_seq

 Title   : primary_seq
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

seq

 Title   : seq
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

subseq

 Title   : subseq
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

moltype

 Title   : moltype
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

desc

 Title   : desc
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

annotation

 Title   : annotation
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

division

 Title   : division
 Usage   : $obj->division($newval)
 Function: Getset for division value
 Returns : value of division
 Args    : newvalue (optional)

get_dates

 Title   : get_dates
 Usage   : $obj->get_dates($newval)
 Function: Getset for get_dates value
 Returns : value of get_dates
 Args    : newvalue (optional)

species

 Title   : species
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

top_SeqFeatures

 Title   : top_SeqFeatures
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

all_SeqFeatures

 Title   : all_SeqFeatures
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

Stored id/values

primary_id

 Title   : primary_id
 Usage   : $obj->primary_id($newval)
 Function: 
 Example : 
 Returns : value of primary_id
 Args    : newvalue (optional)

display_id

 Title   : display_id
 Usage   : $obj->display_id($newval)
 Function: 
 Example : 
 Returns : value of display_id
 Args    : newvalue (optional)

accession

 Title   : accession
 Usage   : $obj->accession($newval)
 Function: 
 Example : 
 Returns : value of accession
 Args    : newvalue (optional)

version

 Title   : version
 Usage   : $obj->version($newval)
 Function: Getset for version value
 Returns : value of version
 Args    : newvalue (optional)

seq_version

 Title   : seq_version
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

adaptor

 Title   : adaptor
 Usage   : $obj->adaptor($newval)
 Function: 
 Example : 
 Returns : value of adaptor
 Args    : newvalue (optional)

keywords

 Title   : keywords
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

length

 Title   : length
 Usage   : $obj->length($newval)
 Function: 
 Example : 
 Returns : value of length
 Args    : newvalue (optional)