NAME

Bio::Tools::Run::PiseApplication::loadseq

SYNOPSIS

  #

DESCRIPTION

Bio::Tools::Run::PiseApplication::loadseq

      Bioperl class for:

        loadseq load several sequences into a file


      Parameters: 

        (see also:
          http://bioweb.pasteur.fr/seqanal/interfaces/loadseq.html 
         for available values):


                loadseq (String)

                explanation (String)

                seq (Sequence)
                        Sequence to load

                name (String)
                        You may give a name to your sequence

                loadresult (String)

                db (Excl)
                        Database

                query (String)
                        query (Entry name or AC)

                ac (Switch)
                        Search with Accession number (except nrl3d)

                outfile (OutFile)
                        pipe: seqsfile

                seqfile (Sequence)
                        Already loaded sequences file
                        pipe: seqsfile

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org              - General discussion
  http://bioperl.org/MailList.shtml  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:

  bioperl-bugs@bioperl.org
  http://bioperl.org/bioperl-bugs/

AUTHOR

Catherine Letondal (letondal@pasteur.fr)

COPYRIGHT

Copyright (C) 2003 Institut Pasteur & Catherine Letondal. All Rights Reserved.

This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

DISCLAIMER

This software is provided "as is" without warranty of any kind.

SEE ALSO

• http://bioweb.pasteur.fr/seqanal/interfaces/loadseq.html

• Bio::Tools::Run::PiseApplication

• Bio::Tools::Run::AnalysisFactory::Pise

• Bio::Tools::Run::PiseJob

new

 Title   : new()
 Usage   : my $loadseq = Bio::Tools::Run::PiseApplication::loadseq->new($location, $email, @params);
 Function: Creates a Bio::Tools::Run::PiseApplication::loadseq object.
           This method should not be used directly, but rather by 
           a Bio::Tools::Run::AnalysisFactory::Pise instance.
           my $factory = Bio::Tools::Run::AnalysisFactory::Pise->new();
           my $loadseq = $factory->program('loadseq');
 Example : -
 Returns : An instance of Bio::Tools::Run::PiseApplication::loadseq.