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Changes for version 1.06 - 2016-06-29

  • Canonicalize bioaln --avpid floating point values
  • Convert links from rocky to bioperl github namespace
  • Start documenting Bio::BPWrapper::SeqManipulations
  • Changes to decrease likelihood automated test failures
  • misc doc changes

Documentation

Bio::Perl Alignment utility wrappers for use Bio::AlignIO, Bio::SimpleAlign and Bio::Align::Utilities
Wrapper script for Bio::Perl's population genetics modules
FASTA sequence utility based on Bio::Perl
FASTA Bio::TreeIO tools

Modules

command-line utilities for Bio::Perl
Functions for bioaln
Functions for biopop
Functions for bioseq
Functions for biotree