Changes for version 0.10.6

  • Perl::Tidy 20090616 passes
  • Added Test::NoWarnings to tests
  • Build dist benchmarks more automated, support for new Sys::Info
  • Agrep back-end: check if agrep is TRE in search(), not new()
  • use autodie instead of Fatal
  • Bugfixes: Fix Warning with Bioperl 1.6.1 (thanks Jeremy)

Documentation

Bio::Grep Benchmarks
Bio::Grep Cookbook

Modules

Perl extension for searching in DNA and Protein sequences
Agrep back-end
Superclass for all back-ends
GUUGle back-end
Perl Regular Expression back-end
Vmatch back-end
Superclass for all filter modules
Superclass for all Bio::Grep* packages
Data structure for a back-end search hit
Data structure for all search settings