all_entities_ReactionRule

Return all instances of the ReactionRule entity.

A reaction rule represents the way a reaction takes place within the context of a complex.

Example:

all_entities_ReactionRule -a 

would retrieve all entities of type ReactionRule and include all fields in the entities in the output.

The ReactionRule entity has the following relationship links:

HasProposedLocationIn Compartment
IsStepOf Complex
IsUseOf Reaction

Command-Line Options

-a

Return all fields.

-h

Display a list of the fields available for use.

-fields field-list

Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:

direction
transproton

Output Format

The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.