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all_entities_Variant

Return all instances of the Variant entity.

Each subsystem may include the designation of distinct variants. Thus, there may be three closely-related, but distinguishable forms of histidine degradation. Each form would be called a "variant", with an associated code, and all genomes implementing a specific variant can easily be accessed.

Example:

    all_entities_Variant -a 

would retrieve all entities of type Variant and include all fields in the entities in the output.

The Variant entity has the following relationship links:

IsDescribedBy Subsystem
IsImplementedBy SSRow

Command-Line Options

-a

Return all fields.

-h

Display a list of the fields available for use.

-fields field-list

Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:

role_rule
code
type
comment

Output Format

The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.