NAME

Bio::AssemblyImprovement::Scaffold::Descaffold - Given a fasta file as input, output a descaffolded multi-fasta file.

VERSION

version 1.160490

SYNOPSIS

Given a fasta file as input, output a descaffolded multi-fasta file.

   use Bio::AssemblyImprovement::Scaffold::Descaffold;

   my $descaffold_obj = Bio::AssemblyImprovement::Scaffold::Descaffold->new(
     input_assembly => 'contigs.fa'
   );

   $descaffold_obj->run();

METHODS

run

Descaffold a FASTA file.

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2012 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007