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Author image Alessandro Vullo
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Copyright [2015-2018] EMBL-European Bioinformatics Institute

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at


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Bio::DB::HTS::Target -- Object representing the query portion of a BAM/SAM alignment in NATIVE alignment


This is identical to Bio::DB::HTS::Query, except that the dna, qscores and start and end positions are all given in the orientation in which the read was sequenced, not in the oreintation in which it was aligned.


Rishi Nag <rishi@ebi.ac.uk<gt>