Andrew Page
and 1 contributors

NAME

Bio::MLST::Spreadsheet::Row - Create a row representation of the ST results for a single fasta file.

VERSION

version 1.133090

SYNOPSIS

Create a row representation of the ST results for a single fasta file.

   use Bio::MLST::Spreadsheet::Row;
   my $spreadsheet_row_obj = Bio::MLST::Spreadsheet::Row->new(
     sequence_type_obj => $sequence_type_obj, 
     compare_alleles   => $compare_alleles
   );
   
   $spreadsheet_row_obj->allele_numbers_row;
   $spreadsheet_row_obj->genomic_row;

METHODS

allele_numbers_row

Returns the spreadsheet row of results containing the allele numbers of the matching sequences.

genomic_row

Returns the spreadsheet row of results containing the genomic sequences of the matches.

SEE ALSO

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2012 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007