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30 Oct 2017 19:50:35 UTC
- Distribution: Bio-Phylo
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Bus factor: 1- 56.90% Coverage
- License: perl_5
- Perl: v5.8.0
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NAME
Bio::Phylo::NeXML::Meta::XMLLiteral - Annotation value adaptor, no direct usage
SYNOPSIS
# no direct usage
DESCRIPTION
No direct usage, is used internally by Bio::Phylo::NeXML::Meta to wrap objects into a common adaptor class for serialization to XML.
METHODS
CONSTRUCTOR
- new()
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Type : Constructor Title : new Usage : my $lit = Bio::Phylo::NeXML::Meta::XMLLiteral->new($obj); Function: Initializes a Bio::Phylo::NeXML::Meta::XMLLiteral object. Returns : A Bio::Phylo::NeXML::Meta::XMLLiteral object. Args : An object (or array ref of objects) to wrap, either a 'RDF::Core::Model' (or subclass), an 'XML::XMLWriter' or (subclass) or any of the following serialization methods used for duck-typing one of the following classes: Bio::Phylo => to_xml, XML::DOM, XML::GDOME, XML::LibXML => toString, XML::Twig => sprint, XML::DOM2 => xmlify, XML::DOMBacked => as_xml, XML::Handler => dump_tree, XML::Element => as_XML XML::API => _as_string, XML::Code => code
SERIALIZERS
- to_xml()
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Serializes invocant to xml.
Type : Serializer Title : to_xml Usage : my $xml = $obj->to_xml; Function: Turns the invocant object (and its descendants) into an XML string. Returns : SCALAR Args : NONE
SEE ALSO
There is a mailing list at https://groups.google.com/forum/#!forum/bio-phylo for any user or developer questions and discussions.
- Bio::Phylo::NeXML::Meta
- Bio::Phylo::Manual
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Also see the manual: Bio::Phylo::Manual and http://rutgervos.blogspot.com.
CITATION
If you use Bio::Phylo in published research, please cite it:
Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. http://dx.doi.org/10.1186/1471-2105-12-63
Module Install Instructions
To install Bio::Phylo, copy and paste the appropriate command in to your terminal.
cpanm Bio::Phylo
perl -MCPAN -e shell install Bio::Phylo
For more information on module installation, please visit the detailed CPAN module installation guide.