• NAME
• DESCRIPTION For more information please see the UMLS::Association.pm documentation.
• SYNOPSIS
• INSTALL
• SEE ALSO
• AUTHOR
• COPYRIGHT

NAME

UMLS::Association::StatFinder - provides the statistical association information of the concept pairs in the UMLS

DESCRIPTION For more information please see the UMLS::Association.pm documentation.

SYNOPSIS

use UMLS::Association::StatFinder; use UMLS::Association::ErrorHandler;

%params = ();

$statfinder = UMLS::Association::StatFinder->new(\%params); die "Unable to create UMLS::Association::StatFinder object.\n" if(!$statfinder);

my $cui1 = C0018563; my $cui2 = C0446516;

# calculate measure assocation my $measure = "ll"; my $score = $statfinder->calculateStatistic($cui1, $cui2, $measure);

INSTALL

    To install the module, run the following magic commands:

    perl Makefile.PL
    make
    make test
    make install

    This will install the module in the standard location. You will, most
    probably, require root privileges to install in standard system
    directories. To install in a non-standard directory, specify a prefix
    during the 'perl Makefile.PL' stage as:

    perl Makefile.PL PREFIX=/home/bridget

    It is possible to modify other parameters during installation. The
    details of these can be found in the ExtUtils::MakeMaker
    documentation. However, it is highly recommended not messing around
    with other parameters, unless you know what you're doing.

SEE ALSO

    <http://tech.groups.yahoo.com/group/umls-similarity/>

AUTHOR

    Bridget T McInnes <bmcinnes@vcu.edu>
    Andriy Y. Mulyar  <andriy.mulyar@gmail.com>
    Alexander D. McQuilkin <alexmcq99@yahoo.com>
    Alex McQuilken <alexmcq99@yahoo.com>
    Sam Henry <henryst@vcu.edu>

COPYRIGHT

    Copyright (c) 2015
    Sam Henry, Virginia Commonwealth University
    henrystat vcu.edu

    This program is free software; you can redistribute it and/or modify it under
    the terms of the GNU General Public License as published by the Free Software
    Foundation; either version 2 of the License, or (at your option) any later
    version.

    This program is distributed in the hope that it will be useful, but WITHOUT
    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
    FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

    You should have received a copy of the GNU General Public License along with
    this program; if not, write to

    The Free Software Foundation, Inc.,
    59 Temple Place - Suite 330,
    Boston, MA  02111-1307, USA.