UMLS::Association::StatFinder - provides the statistical association information of the concept pairs in the UMLS
use UMLS::Association::StatFinder; use UMLS::Association::ErrorHandler;
%params = ();
$statfinder = UMLS::Association::StatFinder->new(\%params); die "Unable to create UMLS::Association::StatFinder object.\n" if(!$statfinder);
my $cui1 = C0018563; my $cui2 = C0446516;
# calculate measure assocation my $measure = "ll"; my $score = $statfinder->calculateStatistic($cui1, $cui2, $measure);
To install the module, run the following magic commands:
This will install the module in the standard location. You will, most
probably, require root privileges to install in standard system
directories. To install in a non-standard directory, specify a prefix
during the 'perl Makefile.PL' stage as:
perl Makefile.PL PREFIX=/home/bridget
It is possible to modify other parameters during installation. The
details of these can be found in the ExtUtils::MakeMaker
documentation. However, it is highly recommended not messing around
with other parameters, unless you know what you're doing.
Bridget T McInnes <firstname.lastname@example.org>
Andriy Y. Mulyar <email@example.com>
Alexander D. McQuilkin <firstname.lastname@example.org>
Alex McQuilken <email@example.com>
Sam Henry <firstname.lastname@example.org>
Copyright (c) 2015
Sam Henry, Virginia Commonwealth University
This program is free software; you can redistribute it and/or modify it under
the terms of the GNU General Public License as published by the Free Software
Foundation; either version 2 of the License, or (at your option) any later
This program is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with
this program; if not, write to
The Free Software Foundation, Inc.,
59 Temple Place - Suite 330,
Boston, MA 02111-1307, USA.
To install UMLS::Association, copy and paste the appropriate command in to your terminal.
perl -MCPAN -e shell
For more information on module installation, please visit the detailed CPAN module installation guide.