children.pl - prints children of a supplied GO node
children.pl simply takes as input a GOID, and an obo file, and an ontology aspect (P, C or F) and prints out the children of that GO node, e.g.:
>children.pl GO:0008150 ../t/gene_ontology_edit.obo P Children of GO:0008150 (biological_process) : GO:0000003 reproduction GO:0007582 physiological process GO:0021700 developmental maturation GO:0050789 regulation of biological process GO:0016032 viral life cycle GO:0043473 pigmentation GO:0007275 development GO:0050896 response to stimulus GO:0009987 cellular process GO:0040007 growth GO:0051704 interaction between organisms
Gavin Sherlock, sherlock@genome.stanford.edu
To install GO::TermFinder, copy and paste the appropriate command in to your terminal.
cpanm
cpanm GO::TermFinder
CPAN shell
perl -MCPAN -e shell install GO::TermFinder
For more information on module installation, please visit the detailed CPAN module installation guide.