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Pheno-Ranker-1.09
⭐ Starred 4

Changes for version 1.09 - 2026-10-09

  • Added a native desktop application for local patient and cohort analysis, result exploration, reusable projects, and Beacon v2 import
  • Migrated project documentation from MkDocs to Docusaurus
  • Replaced bff-pxf-plot PNG output with self-contained HTML reports covering annotation distributions, coverage, and term frequencies
  • Added CLI label exports and optional ontology label hints in PDF reports

Documentation

pheno-ranker:
bff-pxf-simulator:
csv2pheno-ranker:

Modules

Pheno::Ranker
A module that performs semantic similarity in PXF/BFF data structures and beyond (JSON|YAML)

Provides

Ontologies
in utils/bff_pxf_simulator/Ontologies.pm
Pheno::Ranker::CLI
in lib/Pheno/Ranker/CLI.pm
Pheno::Ranker::Compare
in lib/Pheno/Ranker/Compare.pm
Pheno::Ranker::Compare::Alignment
in lib/Pheno/Ranker/Compare/Alignment.pm
Pheno::Ranker::Compare::Encoding
in lib/Pheno/Ranker/Compare/Encoding.pm
Pheno::Ranker::Compare::Matrix
in lib/Pheno/Ranker/Compare/Matrix.pm
Pheno::Ranker::Compare::Ontology
in lib/Pheno/Ranker/Compare/Ontology.pm
Pheno::Ranker::Compare::Prepare
in lib/Pheno/Ranker/Compare/Prepare.pm
Pheno::Ranker::Compare::Prune
in lib/Pheno/Ranker/Compare/Prune.pm
Pheno::Ranker::Compare::Rank
in lib/Pheno/Ranker/Compare/Rank.pm
Pheno::Ranker::Compare::Remap
in lib/Pheno/Ranker/Compare/Remap.pm
Pheno::Ranker::Config
in lib/Pheno/Ranker/Config.pm
Pheno::Ranker::Context
in lib/Pheno/Ranker/Context.pm
Pheno::Ranker::Graph
in lib/Pheno/Ranker/Graph.pm
Pheno::Ranker::IO
in lib/Pheno/Ranker/IO.pm
Pheno::Ranker::Metrics
in lib/Pheno/Ranker/Metrics.pm
Pheno::Ranker::Options
in lib/Pheno/Ranker/Options.pm
Pheno::Ranker::Version
in lib/Pheno/Ranker/Version.pm

Examples

Other files