1.5.6 2023-01-11
* Fixing tests for non verbose continuous integration systems
* Testing fu-extract with a list file
1.5.4 2023-01-09
* Fixing tests
* Fixing future deprecation (unescaped brackets in regex)
* Consistent --version across programs now prints library version too
1.5.3 2023-01-08
* Refactoring test suite (TestFu.pm)
* Updated binaries to uniformly load library and use the unblessed method getRead()
1.5.2 2022-12-01
* Minor fix in POD documentation
1.5.1 2022-06-29
* Minor fix in POD documentation
1.5.0 2022-06-23
* Fix: fu-cat length selection, added test
* Fix: fu-count supports STDIN input
* Added case insensitive option in fu-extract
* Added tests for fu-count, fu-grep, fu-extract
1.4.10 2022-06-22
* Testing external scripts with the right interpreter (thanks to ANDK)
1.4.9 2022-06-22
* Adding PerlIO::encoding as requisite (core since 5.8)
* Investigating tests failing for some users (special thanks to SREZIC)
1.4.8 2022-06-22
* Updated binaries from Seqfu 0.x
1.4.7 2022-06-21
* Preparing for 5.32
* Documentation fixes
* Updated Windows tests
1.4.6 2022-06-20
* Extended documentation
1.4.5 2022-06-19
* Migration of legacy scripts to the Proch-N50 repository
* Minor changes to the documentation and updated links
1.4.4 2022-06-12
* Starting migration of the repository to telatin/proch-n50
1.4.3 2022-06-02
* Fixed future deprecation on regexes
* Update FASTX::Reader version required (should fix a bug opened in rt)
1.4.2 2021-11-02
* Fixed perlcritic warnings on 'n50'
* Repository update, documentation update, improved errors in wrong lib version detected
1.4.1 2021-08-06
* Documenation updated with links to the correct repository
* Skip Windows support test when older FASTX::Reader is in use
1.4.0 2021-08-05
* Testing support for Windows newlines
* Updating documentation
1.3.0 2020-04-11
* checking that the input files contains sequences
* BUG FIX: Wrong auN returned if thousands separator was also enabled
* 'n50' program now supports custom "Nx" (-e INT)
1.2.0 2020-04-09
* getStats() now also returns "N75" and "N90" statistics
* getStats() now also returns "path", the absolute path to "dirname"
* getStats() can return a N{X} metrics, if invoked as getStats(file, json, X);
* 'n50' program partially supports the new metrics
1.0.0 2020-03-16
* First stable release (stable APIs)
* Switched to semantic versioning
* Moved repository in the 'seqfu' package
* FIXED sorting bug in 'n50'
0.92 2020-01-31
* Downgrading requisite to perl 5.14
0.90 2020-01-16
* FIXED: binary 'n50': Sorting tables did not work with -q (thousands separator)
* FIXED: binary 'n50': Quotes added when using -q (thousands separator) and CSV format
0.83 2019-08-20
* Moved 'n50' tests to xt/release
0.82 2019-08-19
* Extending test suite on the 'n50' implementation
* Thousand separator: Fixed a bug in 'n50' where the feature was always on
0.80 2019-08-18
* Only "bin/n50" has been updated
* NEW: Added -q for thousand separator (will cause adding quotes in --format csv)
* Now also n50 migrated to JSON::PP, as Proch::N50 does since 0.04
* Prints a short usage if invoked without filenames
* Warning printed if using --format custom without --template
* Added aliases in --template for newline ({n} and \n) and tab ({t} and \t)
0.80 2019-08-16
* NEW: binary 'n50': Added -q for thousand separator
* Now also n50 migrated to JSON::PP, as Proch::N50 does since 0.04
* Prints a short usage if invoked without filenames
* Warning printed if using --format custom without --template
* Added aliases in --template for newline ({n} and \n) and tab ({t} and \t)
0.70 2019-08-16
* FIXED: binary 'n50' was producing a pretty printed JSON even without --pretty [since transition to JSON:PP]
0.60 2019-08-15
* MAJOR: Renamed the bundled script from n50.pl to n50
* Minor cleanup
* First release available in 'bioconda'
0.20 2019-06-30
* Simplified test in JSON method (output unchanged)
* Changes file cleaned; added a test for wide chars in changelog
0.10 2019-05-30
* NEW: added sorting function to n50.pl (useful for 'screen' format)
* FIXED: JSON object returned N50, min and max quoted (strings) rather than integers
* Minor changes in dist.ini and release tests
0.09 2019-05-29
* Added ./bin directory to provide excutable scripts
* n50.pl now accepts sequence with zero length (as seqkit)
* n50.pl new output format (screen friendly) using Text::ASCIITables only if requested
* Coverage directives for Devel::Coverage
* Extensive test of the algorithm
0.08 2019-05-23
* Removed redundant POD paragraphs
* Added unit test on non existing file
* Fixed bug in n50.pl script
* Added a test of the n50.pl script after build
* Added a test of Changes that should contain last version
0.07 2019-05-22
* PAUSE indexing problem
* Updated FASTX::Reader to 0.09
0.06 2019-05-15
* Moved version check to release tests
0.05 2019-05-09
* MAJOR: Transition to FASTX::Reader to parse FASTA file
* Code updated
* Improving documentation coverage
* Feature freeze aiming to release v 0.1 stable
0.04 2019-05-06
* Transition to JSON::PP, now required since its a core module
* Updated POD documentation
* Updated JSON tests
* Resubmitted as v 0.040 (PAUSE upload problem)
0.039 2019-05-05
* NEW: Added 'min' and 'max' (lengths) in returned stats
* Updated requirements specs in YML distribution file
0.032 2019-05-04
* JSON unit test: restored conditional test
* Removed unnecessary files from distribution (Dist::Zilla::Plugin::VersionFromModule/)
0.031 2019-05-03
* Removed JSON unit test: this module has been built to only optionally require it. Even unit tests can have bugs.
0.03 2019-05-02
* Added method _getJsonStats()_ to directly receive JSON string
* Expanded json unit test accordingly
0.023 2019-05-01
* Updated dist.ini [Dist::Zilla::Role::ModuleMetadata]
* Synopsis uses print instead of say
* Added CPAN distribution tests (CPAN Version check, POD integrity, Changes, Kwalitee...)
* Added unit tests for getStats() and getStats with JSON
0.022 2019-05-01
* Improved POD documentation
* Fixed name in n50_algorithm.pl
0.021 2019-05-01
* Improved POD documentation
* Added a demo implementation of n50.pl using Proch::N50, keeping n50_algorithm.pl that does the same but without Proch::N50
0.02 2019-04-30
* Added this Changelog
* Removed unnecessary variables
* Fixed POD documentation
- TODO: Bareword filehandle: currently used as readfq() needs it
0.01 2019-04-30
* Initial release on CPAN