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Changes for version 0.3 - 2011-04-21

  • fixed bug in SyncDirectives (gff3_insert_sync_directives) transform, did not work if the file contained trailing tabs.
  • added Bio::GFF3::Transform::FromFasta, which can make gff3 from fasta

Documentation

make GFF3 from fasta sequences
efficiently insert sync (###) directives into GFF3, printing to stdout

Modules

fast, low-level functions for parsing and formatting GFF3
make gff3 for the sequences in a fasta file
insert sync (###) directives into an existing GFF3 file.