NAME

Bio::BPWrapper::TreeManipulations - Functions for biotree

SYNOPSIS

    use Bio::BPWrapper::TreeManipulations;
    # Set options hash ...
    initialize(\%opts);
    write_out(\%opts);

SUBROUTINES

initialize()

Sets up most of the actions to be performed on an alignment.

Call this right after setting up an options hash.

Sets package variables: $in_format, @nodes, $tree, $out_format, and $out.