NAME
Bio::Phylo::Matrices::Datatype::Restriction - Validator subclass, no serviceable parts inside
DESCRIPTION
The Bio::Phylo::Matrices::Datatype::* classes are used to validate data contained by Bio::Phylo::Matrices::Matrix and Bio::Phylo::Matrices::Datum objects.
METHODS
- get_ids_for_special_symbols()
-
Gets state-to-id mapping for missing and gap symbols
Type : Accessor Title : get_ids_for_special_symbols Usage : my %ids = %{ $obj->get_ids_for_special_symbols }; Function: Returns state-to-id mapping Returns : An empty hash reference Args : None Notes : This method is here as an override because restriction site data has no missing or gap symbols, just presence/absence
SEE ALSO
- Bio::Phylo::Matrices::Datatype
-
This class subclasses Bio::Phylo::Matrices::Datatype.
- Bio::Phylo::Manual
-
Also see the manual: Bio::Phylo::Manual and http://rutgervos.blogspot.com.
REVISION
$Id: Restriction.pm 1235 2010-03-02 16:11:07Z rvos $