Changes for version 0.08 - 2007-01-31
- Add new method for Sequence.pm (get_raw_seq) Fixed the motif drawing in Graphics::Feature module Fixed the get_fasta method (add a new line to the end :-)) Add new method for SequenceFeature.pm (length) Add new object (Util::Run::Mofext) Fixed the get_subset_id methods in Bio::DOOP::Motif Add more warning messages to the Cluster and ClusterSubset objects
Modules
DoOP cluster object
One subset of a cluster
MySQL control object
DOOP API main module
graphical representation of the features
DOOP database conserved motif object
promoter sequence object
Object for the sequence features
Mofext runner module
useful subrutines for easy search