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BEGIN {
$Bio::Chado::Schema::General::Dbxref::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
$Bio::Chado::Schema::General::Dbxref::VERSION = '0.07000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
__PACKAGE__->table("dbxref");
__PACKAGE__->add_columns(
"dbxref_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "dbxref_dbxref_id_seq",
},
"db_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"accession",
{ data_type => "varchar", is_nullable => 0, size => 255 },
"version",
{ data_type => "varchar", default_value => "", is_nullable => 0, size => 255 },
"description",
{ data_type => "text", is_nullable => 1 },
);
__PACKAGE__->set_primary_key("dbxref_id");
__PACKAGE__->add_unique_constraint("dbxref_c1", ["db_id", "accession", "version"]);
__PACKAGE__->has_many(
"arraydesigns",
"Bio::Chado::Schema::Mage::Arraydesign",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"assays",
"Bio::Chado::Schema::Mage::Assay",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"biomaterials",
"Bio::Chado::Schema::Mage::Biomaterial",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"biomaterial_dbxrefs",
"Bio::Chado::Schema::Mage::BiomaterialDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"cell_line_dbxrefs",
"Bio::Chado::Schema::CellLine::CellLineDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->might_have(
"cvterm",
"Bio::Chado::Schema::Cv::Cvterm",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"cvterm_dbxrefs",
"Bio::Chado::Schema::Cv::CvtermDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->belongs_to(
"db",
"Bio::Chado::Schema::General::Db",
{ db_id => "db_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
__PACKAGE__->has_many(
"dbxrefprops",
"Bio::Chado::Schema::Cv::Dbxrefprop",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"elements",
"Bio::Chado::Schema::Mage::Element",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"features",
"Bio::Chado::Schema::Sequence::Feature",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"feature_cvterm_dbxrefs",
"Bio::Chado::Schema::Sequence::FeatureCvtermDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"feature_dbxrefs",
"Bio::Chado::Schema::Sequence::FeatureDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"library_dbxrefs",
"Bio::Chado::Schema::Library::LibraryDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"nd_experiment_dbxrefs",
"Bio::Chado::Schema::NaturalDiversity::NdExperimentDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"nd_experiment_stock_dbxrefs",
"Bio::Chado::Schema::NaturalDiversity::NdExperimentStockDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"organism_dbxrefs",
"Bio::Chado::Schema::Organism::OrganismDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"phylonode_dbxrefs",
"Bio::Chado::Schema::Phylogeny::PhylonodeDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"phylotrees",
"Bio::Chado::Schema::Phylogeny::Phylotree",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"protocols",
"Bio::Chado::Schema::Mage::Protocol",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"pub_dbxrefs",
"Bio::Chado::Schema::Pub::PubDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"stocks",
"Bio::Chado::Schema::Stock::Stock",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"stock_dbxrefs",
"Bio::Chado::Schema::Stock::StockDbxref",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
__PACKAGE__->has_many(
"studies",
"Bio::Chado::Schema::Mage::Study",
{ "foreign.dbxref_id" => "self.dbxref_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
# Created by DBIx::Class::Schema::Loader v0.07001 @ 2010-08-16 23:01:56
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:ZJLCc473+PTc1EIgOlcgGQ
__PACKAGE__->many_to_many
(
'biomaterials_mm',
'biomaterial_dbxrefs' => 'biomaterial',
);
__PACKAGE__->many_to_many
(
'cell_lines_mm',
'cell_line_dbxrefs' => 'cell_line',
);
__PACKAGE__->many_to_many
(
'cvterms_mm',
'cvterm_dbxrefs' => 'cvterm',
);
__PACKAGE__->many_to_many
(
'features_mm',
'feature_dbxrefs' => 'feature',
);
__PACKAGE__->many_to_many
(
'libraries_mm',
'library_dbxrefs' => 'library',
);
__PACKAGE__->many_to_many
(
'organisms_mm',
'organism_dbxrefs' => 'organism',
);
__PACKAGE__->many_to_many
(
'phylonodes_mm',
'phylonode_dbxrefs' => 'phylonode',
);
__PACKAGE__->many_to_many
(
'pubs_mm',
'pub_dbxrefs' => 'pub',
);
__PACKAGE__->many_to_many
(
'stocks_mm',
'stock_dbxrefs' => 'stock',
);
# You can replace this text with custom content, and it will be preserved on regeneration
1;
__END__
=pod
=encoding utf-8
=head1 NAME
Bio::Chado::Schema::General::Dbxref
=head1 DESCRIPTION
A unique, global, public, stable identifier. Not necessarily an external reference - can reference data items inside the particular chado instance being used. Typically a row in a table can be uniquely identified with a primary identifier (called dbxref_id); a table may also have secondary identifiers (in a linking table <T>_dbxref). A dbxref is generally written as <DB>:<ACCESSION> or as <DB>:<ACCESSION>:<VERSION>.
=head1 NAME
Bio::Chado::Schema::General::Dbxref
=head1 ACCESSORS
=head2 dbxref_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'dbxref_dbxref_id_seq'
=head2 db_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 accession
data_type: 'varchar'
is_nullable: 0
size: 255
The local part of the identifier. Guaranteed by the db authority to be unique for that db.
=head2 version
data_type: 'varchar'
default_value: (empty string)
is_nullable: 0
size: 255
=head2 description
data_type: 'text'
is_nullable: 1
=head1 RELATIONS
=head2 arraydesigns
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::Arraydesign>
=head2 assays
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::Assay>
=head2 biomaterials
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::Biomaterial>
=head2 biomaterial_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::BiomaterialDbxref>
=head2 cell_line_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::CellLine::CellLineDbxref>
=head2 cvterm
Type: might_have
Related object: L<Bio::Chado::Schema::Cv::Cvterm>
=head2 cvterm_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Cv::CvtermDbxref>
=head2 db
Type: belongs_to
Related object: L<Bio::Chado::Schema::General::Db>
=head2 dbxrefprops
Type: has_many
Related object: L<Bio::Chado::Schema::Cv::Dbxrefprop>
=head2 elements
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::Element>
=head2 features
Type: has_many
Related object: L<Bio::Chado::Schema::Sequence::Feature>
=head2 feature_cvterm_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Sequence::FeatureCvtermDbxref>
=head2 feature_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Sequence::FeatureDbxref>
=head2 library_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Library::LibraryDbxref>
=head2 nd_experiment_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::NaturalDiversity::NdExperimentDbxref>
=head2 nd_experiment_stock_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::NaturalDiversity::NdExperimentStockDbxref>
=head2 organism_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Organism::OrganismDbxref>
=head2 phylonode_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Phylogeny::PhylonodeDbxref>
=head2 phylotrees
Type: has_many
Related object: L<Bio::Chado::Schema::Phylogeny::Phylotree>
=head2 protocols
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::Protocol>
=head2 pub_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Pub::PubDbxref>
=head2 stocks
Type: has_many
Related object: L<Bio::Chado::Schema::Stock::Stock>
=head2 stock_dbxrefs
Type: has_many
Related object: L<Bio::Chado::Schema::Stock::StockDbxref>
=head2 studies
Type: has_many
Related object: L<Bio::Chado::Schema::Mage::Study>
=head1 MANY-TO-MANY RELATIONSHIPS
=head2 biomaterials_mm
Relation to L<Bio::Chado::Schema::Mage::Biomaterial> (i.e. C<biomaterial> table)
via the C<organism_dbxrefs> table.
=head2 cell_lines_mm
Relation to L<Bio::Chado::Schema::CellLine::CellLine> (i.e. C<cell_line> table)
via the C<cell_line_dbxrefs> table.
=head2 cvterms_mm
Relation to L<Bio::Chado::Schema::Cv::Cvterm> (i.e. C<cvterm> table)
via the C<cvterm_dbxrefs> table.
=head2 features_mm
Relation to L<Bio::Chado::Schema::Sequence::Feature> (i.e. C<feature> table)
via the C<feature_dbxrefs> table.
=head2 libraries_mm
Relation to L<Bio::Chado::Schema::Library::LibraryDbxref> (i.e. C<library> table)
via the C<library_dbxrefs> table.
=head2 organisms_mm
Relation to L<Bio::Chado::Schema::Organism::Organism> (i.e. C<organism> table)
via the C<organism_dbxrefs> table.
=head2 phylonodes_mm
Relation to L<Bio::Chado::Schema::Phylogeny::Phylonode> (i.e. C<phylonode> table)
via the C<phylonode_dbxrefs> table.
=head2 pubs_mm
Relation to L<Bio::Chado::Schema::Pub::Pub> (i.e. C<pub> table)
via the C<pub_dbxrefs> table.
=head2 stocks_mm
Relation to L<Bio::Chado::Schema::Stock::Stock> (i.e. C<stock> table)
via the C<stock_dbxrefs> table.
=head1 AUTHOR
Robert Buels <rbuels@cpan.org>
=head1 COPYRIGHT AND LICENSE
This software is copyright (c) 2009 by Robert Buels.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
=cut