++ed by:
YZHERNAND CJFIELDS MOCNII MAJENSEN
1 non-PAUSE user
Author image Lincoln D. Stein

Changes for version 1.43

  • Added a few files that were missing from MANIFEST and which were therefore making it impossible to install from CPAN.

Modules

Add high-level methods to Bio::DB::Bam::Alignment
The SAM/BAM alignment object
Object passed to pileup() callback
Add high-level methods to Bio::DB::Bam::Pileup
Object representing the query portion of a BAM/SAM alignment
Object representing the query portion of a BAM/SAM alignment in NATIVE alignment
Read SAM/BAM database files
Constants for use with SAM/BAM

Provides

in lib/Bio/DB/Sam.pm
in lib/Bio/DB/Bam/FetchIterator.pm
in lib/Bio/DB/Bam/ReadIterator.pm
in lib/Bio/DB/Bam/AlignWrapper.pm
in lib/Bio/DB/Sam.pm
in lib/Bio/DB/Sam/SamToGBrowse.pm
in lib/Bio/DB/Sam/Segment.pm
in lib/Bio/DB/Sam/Segment.pm
in lib/Bio/DB/Sam.pm