ab2fq - A script to convert traces to FASTQ
version 1.0.1
Convert one or multiple traces to FASTQ.
abi2fq [options] <abi_file>...
-q
--min-qual
Minimum quality score to output. Default: 40
--out-quality
Force a fixed quality in the FASTQ output
--force
Print a single sequence per chromatogram even if ambiguous bases are present
Andrea Telatin <andrea@telatin.com>
This software is Copyright (c) 2019 by Andrea Telatin.
This is free software, licensed under:
The MIT (X11) License
To install FASTX::Abi, copy and paste the appropriate command in to your terminal.
cpanm
cpanm FASTX::Abi
CPAN shell
perl -MCPAN -e shell install FASTX::Abi
For more information on module installation, please visit the detailed CPAN module installation guide.