FASTX-Abi

Changes for version 1.0.1 - 2021-11-12

Documentation updates
Minor changes in mergeabi

Documentation

ab2fq

A script to convert traces to FASTQ

mergeabi

Merge forward and reverse ABI files into a single sequence

stripabitags

Remove tags by content from ABI traces

Modules

FASTX::Abi

Read Sanger trace file (chromatograms) in FASTQ format. For traces called with hetero option, the ambiguities will be split into two sequences to allow usage from NGS tools that usually do not understand IUPAC ambiguities.

FASTX::sw

Other files

CONTRIBUTING.md
Changes
LICENSE
MANIFEST
META.json
META.yml
Makefile.PL
README
README.md
dist.ini

To install FASTX::Abi, copy and paste the appropriate command in to your terminal.

cpanm

cpanm FASTX::Abi

CPAN shell

perl -MCPAN -e shell
install FASTX::Abi

For more information on module installation, please visit the detailed CPAN module installation guide.

	Global
`s`	Focus search bar
`?`	Bring up this help dialog

	GitHub
`g` `p`	Go to pull requests
`g` `i`	go to github issues (only if github is preferred repository)

	POD
`g` `a`	Go to author
`g` `c`	Go to changes
`g` `i`	Go to issues
`g` `d`	Go to dist
`g` `r`	Go to repository/SCM
`g` `s`	Go to source
`g` `b`	Go to file browse

	Search terms
module: (e.g. module:Plugin)
distribution: (e.g. distribution:Dancer auth)
author: (e.g. author:SONGMU Redis)
version: (e.g. version:1.00)

Changes for version 1.0.1 - 2021-11-12

Documentation

Modules

Other files

Module Install Instructions