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23 Feb 2022 00:55:44 UTC
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- License: perl_5
- Perl: v5.8.0
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Changes for version 0.053 - 2022-02-22
Modules
HackaMol: Object-Oriented Library for Molecular HackingAngle class for HackaMolHackaMol Atom ClassHackaMol AtomGroup classHackaMol Bond classDihedral Angle class for HackaMolMolecule class for HackaMolpackage for period table data... needs to changeRole for a group of atomsArray traits for containers of HackaMol Bonds, Angles, Dihedrals.Role for using LWP::Simple to fetch files from wwwRead files with molecular informationRole providing Natural extension reference frame implementation for molecular buildingprovides name attributePdbRole of lazy attributes for HackaMol atomsProvides the core of HackaMol Atom and Molecule classes.simple role that provides attributes needed for setting up quantum chemistry calculationsprovides attributes needed for quantum chemistry calculationsRead files with molecular informationRead files with molecular informationRead files with molecular informationparse PDBx/mmCIF filesRead files with molecular informationRead files with molecular informationRead files with molecular informationAtom selections in moleculesExamples
- examples/Analysis/BackBone_Dihedrals.pl
- examples/Analysis/Bfact.pl
- examples/Analysis/mol_maxdist.pl
- examples/BFP/2cba.pl
- examples/Benchmarks/Atom-MVR-timer.pl
- examples/Benchmarks/MVR.pl
- examples/Benchmarks/Mem.pl
- examples/Capsid/capsid.pl
- examples/Cofactor/feheme.pl
- examples/GSSG/GSSG_3DK4.pl
- examples/GSSG/GSSG_GSHgSG.pl
- examples/GSSG/GSSG_rotate.pl
- examples/MCE/README
- examples/MCE/carve_around_ss_mce.pl
- examples/MCE/heavy_mvr.pl
- examples/MolAdjust/readpdb_select_write.pl
- examples/MolAdjust/strip_tip_rename_his.pl
- examples/MolFun/Maximum_distance.pl
- examples/MolFun/Orbit_Protein.pl
- examples/MolFun/README
- examples/MolFun/bin_expand.pl
- examples/MolFun/graphene_roll.pl
- examples/MolFun/loadPDB_transrot.pl
- examples/MolFun/spinning_ball.pl
- examples/MolFun/unfoldBB_mol.pl
- examples/MolFun/unfoldBB_movie.pl
- examples/MolReadPrintWrite/corg09_2xyz.pl
- examples/MolReadPrintWrite/pdbqt_pdb.pl
- examples/MolReadPrintWrite/print_pdb.pl
- examples/MolReadPrintWrite/print_ts.pl
- examples/MolReadPrintWrite/print_xyz.pl
- examples/MolReadPrintWrite/xyz_xyz.pl
- examples/OBabel/AAs_build.pl
- examples/OBabel/Folic_acid.pl
- examples/OBabel/README
- examples/Unfold/unfold_mol.pl
- examples/Wonkish/UML.pl
- examples/Wonkish/lazy_attr.pl
- examples/Wonkish/refaddr_mvr.pl
- examples/Wonkish/waterdat.pl
- examples/Zmatrix/H14C6O4N2.zmat
- examples/Zmatrix/ethane_ss.pl
- examples/Zmatrix/propane_ss.pl
- examples/Zmatrix/valine.zmat
- examples/Zmatrix/zmat.pl
- examples/cif/horrible_no_good_regression_tests.pl
- examples/cif/parse_dump.pl
- examples/cif/parse_dump_mols.pl
- examples/group_rot.pl
- examples/hackamol_synopsis.pl
- examples/kdtree_neigh/cys_neigh.pl
- examples/kdtree_neigh/sphere_carve.pl
- examples/store.pl
- examples/store_mol.pl
- examples/superpose/superpose_nmr.pl
- examples/xtal/xtal.pl
- examples/xtal/xtal_kdtree.pl
- examples/xtal/xtal_kmeans.pl
Module Install Instructions
To install HackaMol, copy and paste the appropriate command in to your terminal.
cpanm HackaMol
perl -MCPAN -e shell install HackaMol
For more information on module installation, please visit the detailed CPAN module installation guide.