App::Dazz - Daligner-based UniTig utils
dazz <command> [-?h] [long options...] -? -h --help show help Available commands: commands: list the application's commands help: display a command's help screen contained: discard contained unitigs cover: trusted regions in the first file covered by the second dazzname: rename FASTA reads for dazz_db group: group anchors by long reads layout: layout anchors within a group merge: merge overlapped unitigs orient: orient overlapped sequences to the same strand overlap: detect overlaps by daligner overlap2: detect overlaps between two (large) files by daligner show2ovlp: LAshow outputs to overlaps
Run dazz help command-name for usage information.
dazz help command-name
App::Dazz comprises some Daligner-based UniTig utils
brew install brewsci/science/poa brew install wang-q/tap/faops brew install wang-q/tap/dazz_db@20201008 brew install wang-q/tap/daligner@20201008 brew install wang-q/tap/intspan cpanm --installdeps https://github.com/wang-q/App-Dazz/archive/0.1.0.tar.gz # cpanm --installdeps --verbose --mirror-only --mirror http://mirrors.ustc.edu.cn/CPAN/ https://github.com/wang-q/App-Dazz.git cpanm -nq https://github.com/wang-q/App-Dazz/archive/0.1.0.tar.gz # cpanm -nq https://github.com/wang-q/App-Dazz.git
Qiang Wang <wang-q@outlook.com>
This software is copyright (c) 2017 by Qiang Wang.
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
To install App::Dazz, copy and paste the appropriate command in to your terminal.
cpanm
cpanm App::Dazz
CPAN shell
perl -MCPAN -e shell install App::Dazz
For more information on module installation, please visit the detailed CPAN module installation guide.