Bio::AutomatedAnnotation::External::Cmscan - Run and parse the output of cmscan
version 1.182770
Run and parse the output of cmscan use Bio::AutomatedAnnotation::External::Cmscan;
my $obj = Bio::AutomatedAnnotation::External::Cmscan->new( cmdb => 'database/cm/Bacteria', input_file => 'abc.fa', exec => 'cmscan', version => '1.1', cpus => 1, evalue => 1E-6, ); $obj->features;
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::AutomatedAnnotation, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::AutomatedAnnotation
CPAN shell
perl -MCPAN -e shell install Bio::AutomatedAnnotation
For more information on module installation, please visit the detailed CPAN module installation guide.