NAME

Convert::Pheno - A module to interconvert common data models for phenotypic data

SYNOPSIS

 use Convert::Pheno;

 my $my_pxf_json_data = {
     "phenopacket" => {
         "id"      => "P0007500",
         "subject" => {
             "id"          => "P0007500",
             "dateOfBirth" => "unknown-01-01T00:00:00Z",
             "sex"         => "FEMALE"
         }
     }
 };

 # Create object
 my $convert = Convert::Pheno->new(
     {
         data   => $my_pxf_json_data,
         method => 'pxf2bff'
     }
 );

 # Apply a method
 my $data = $convert->pxf2bff;

DESCRIPTION

For a better description, please read the following documentation:

General:

https://cnag-biomedical-informatics.github.io/convert-pheno

Command-Line Interface:

https://github.com/CNAG-Biomedical-Informatics/convert-pheno#readme

CITATION

The author requests that any published work that utilizes Convert-Pheno includes a cite to the the following reference:

Rueda, M et al., (2024). Convert-Pheno: A software toolkit for the interconversion of standard data models for phenotypic data. Journal of Biomedical Informatics. DOI

AUTHOR

Written by Manuel Rueda, PhD. Info about CNAG can be found at https://www.cnag.eu.

METHODS

See https://cnag-biomedical-informatics.github.io/convert-pheno/use-as-a-module.

COPYRIGHT

This PERL file is copyrighted. See the LICENSE file included in this distribution.