GenOO::Junction - A junction (eg exon-exon) object with features
# This class represents the connection of two genomic regions in its # simplest form. It basically only contains the connecting genomic positions # To instantiate my $junction = GenOO::Junction->new( species => undef, strand => undef, chromosome => undef, start => undef, stop => undef, });
The GenOO::Junction class descibes a genomic junction.
my $junction = GenOO::Junction->new( species => transcript->species, strand => transcript->strand, chromosome => transcript->chromosome, start => exon1->stop, stop => exon2->start, );
To install GenOO, copy and paste the appropriate command in to your terminal.
cpanm
cpanm GenOO
CPAN shell
perl -MCPAN -e shell install GenOO
For more information on module installation, please visit the detailed CPAN module installation guide.