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MOBY-1.05
River stage one • 1 direct dependent • 1 total dependent
++

Changes for version 1.05

  • Multiple bug fixes / additions to installer (thanks to Jason Stewart), as follows: Additions
    • detecting root and giving a warning if not root
    • creating apache file in conf.d/ if running apache2
    • added apache defaults for debian/ubuntu systems
    • added a couple longer messages to give people a heads up what is happening.
    • changed many/most of the do {...} if pprompt() to if (prompt()) {...}
    • changed the big multi-line messages from multiple say "..." to say <<EOT;
    • re-indented most of the file - the whitespace was messed up on Emacs22.
    • bug fixes
    • the prompt menu for cloning the DB has a default of 'b' in the prompt string, but no default in the actual call to prompt() so if the user didn't type anything they got an ugly error
    • in prompt_for_directory() switched the cases around for -e and -w otherwise -e wouldn't get triggered
    • in config_file_from_template() added an if defined $fh test
    • added a chmod 644 to the mobycentral.config because it has the DB root password
    • called die() if mysql wasn't detected
  • fixed a bug in the service_tester.pl script that referenced $opt_c instead of $url. (thanks to Jason Stewart)
  • prompt for a username/password for the registry to access the db. if the user doesnt exist, we add it. This helps us stay away from using the root password in the mobycentral.config file.
  • Fixed bug in the service instance cache code. Services from service providers with other registered services was not updating itself correctly.
  • isAlive information is removed from cached rdf because it made absolutely no sense keeping it there.
  • #'s converted to forward slashes so that the URIs are resolvable
  • fixed a bug in Services.pm that caused the incorrect domain name to be placed
  • file MOBY-Server/t/MOBY.t removed because it was tesing a non-existant module
  • fixed the installer script, username/password, root/root was hardcoded
  • fixed a bug in MOBY::dbConfig that caused certain parameters to be ignored in the configuration file if a field was empty.
  • added a caching script to be used by registry providers needing to update their cache. For more information, run: moby-s-caching.pl -h

Modules

MOBY::Adaptor::moby::DataAccessI
This file may need to be renamed and may not make sense as an interface.
MOBY::Adaptor::moby::DataAdapterI
An interface definition for MOBY Central underlying data-stores
MOBY::Adaptor::moby::impl::FetaQueryAdaptor.pm
FetaQueryAdaptor
MOBY::Adaptor::moby::Impl::NamespaceDataAdapter
An interface definition for MOBY Central underlying data-stores
MOBY::Adaptor::moby::Impl::ObjectDataAdapter
An interface definition for MOBY Central underlying data-stores
MOBY::Adaptor::moby::Impl::ServiceInstanceDataAdapter
An interface definition for MOBY Central underlying data-stores
MOBY::Adaptor::moby::Impl::ServiceTypeDataAdapter
An interface definition for MOBY Central underlying data-stores
MOBY::Adaptor::moby::queryapi
An interface definition for MOBY Central underlying data-stores
MOBY::Admin
API for adminning the MOBY Central registry
MOBY::Async
a set of tools for Asynchronous MOBY Services
MOBY::Async::LSAE
utilities to work with LSAE analysis event blocks
MOBY::Async::Service
an object for communicating with Asynchronous MOBY Services
MOBY::Async::SimpleServer
a base class for simple Asynchronous MOBY Services
MOBY::Async::WSRF
utilities to work with WSRF in MOBY
MOBY::Central
API for communicating with the MOBY Central registry
MOBY::Client::Central
a client side wrapper for MOBY Central
MOBY::Client::CollectionArticle
a small object describing the Collection articles from the findService Response message of MOBY Central or representing the collection part of a MOBY invocation or response block
MOBY::Client::Exception::MobyException
MobyException
MOBY::Client::Exception::MobyExceptionCodes
MobyExceptionCodes
MOBY::Client::OntologyServer
A client interface to the Ontology Server at MOBY Central
MOBY::Client::Registration
an object to wrap the registration XML from MOBY Central
MOBY::Client::SecondaryArticle
a small object describing the Simple articles from the findService Response message of MOBY Central
MOBY::Client::Service
an object for communicating with MOBY Services
MOBY::Client::ServiceInstance
a small object describing a MOBY service
MOBY::Client::SimpleArticle
a small object describing the Simple articles from the findService Response message of MOBY Central
MOBY::Client::SimpleInput
a small object describing a MOBY service
MOBY::CommonSubs
a set of exportable subroutines that are useful in clients and services to deal with the input/output from MOBY Services
MOBY::Config
An object containing information about how to get access to teh Moby databases, resources, etc. from the mobycentral.config file
MOBY::CrossReference
a small object describing a MOBY Simple input/output article
MOBY
API for hosting and/or communicating with a MOBY Central registry
MOBYXSLT
CommonSubs using XSLT
MOBY::OntologyServer
A way for MOBY Central to query the object, service, namespace, and relationship ontologies
MOBY::RDF::Ontologies::Cache::CacheUtils
Utility module that aids in caching
MOBY::RDF::Ontologies::Cache::NamespaceCache
Module for creating a cache of namespaces for use when generating RDF
MOBY::RDF::Ontologies::Cache::ObjectCache
Module for creating a cache of datatypes for use when generating RDF
MOBY::RDF::Ontologies::Cache::ServiceCache
Module for creating a cache of service instances for use when generating RDF
MOBY::RDF::Ontologies::Cache::ServiceTypeCache
Module for creating a cache of service types for use when generating RDF
MOBY::RDF::Ontologies::Namespaces
Create RDF/OWL for Moby
MOBY::RDF::Ontologies::Objects
Create RDF/OWL for Moby datatypes
MOBY::RDF::Ontologies::ServiceTypes
Create RDF/OWL for Moby
MOBY::RDF::Ontologies::Services
Create RDF/OWL for Moby
MOBY::RDF::Parsers::DatatypeParser
An module for obtaining datatypes from the RDF Namespace ontology
MOBY::RDF::Parsers::NamespaceParser
An module for obtaining namespaces from the RDF Namespace ontology
MOBY::RDF::Parsers::ServiceTypeParser
An module for obtaining services from the RDF Service Type ontology
MOBY::RDF::Utils
Create RDF/OWL for Moby datatypes
MOBY::authority
a lightweight connection to the authority table in the database
MOBY::central_db_connection
container object for a specific DB connection
MOBY::collection_input
a lightweight connection to the collection_input table in the database
MOBY::collection_output
a lightweight connection to the collection_output table in the database
MobyNamespaceType
LSID Metadata Handler
MOBY::mysql
makes a MYSQL database connection.
MOBY::secondary_input
a lightweight connection to the secondary_input table in the database
MOBY::service_instance
a lightweight connection to the service_instance table in the database
MOBY::service_type
a lightweight connection to the service_type table in the database
MOBY::simple_input
a lightweight connection to the simple_input table in the database
MOBY::simple_output
a lightweight connection to the simple_output table in the database

Provides

LSAE::AnalysisEventBlock
in lib/MOBY/Async/LSAE.pm
MOBY::Adaptor::moby::queryapi::mysql
in lib/MOBY/Adaptor/moby/queryapi/mysql.pm
MOBY::MobyXMLConstants
in lib/MOBY/MobyXMLConstants.pm
MOBY::RDF::Predicates::DC_PROTEGE
in lib/MOBY/RDF/Predicates/DC_PROTEGE.pm
MOBY::RDF::Predicates::FETA
in lib/MOBY/RDF/Predicates/FETA.pm
MOBY::RDF::Predicates::MOBY_PREDICATES
in lib/MOBY/RDF/Predicates/MOBY_PREDICATES.pm
MOBY::RDF::Predicates::OMG_LSID
in lib/MOBY/RDF/Predicates/OMG_LSID.pm
MOBY::RDF::Predicates::OWL
in lib/MOBY/RDF/Predicates/OWL.pm
MOBY::RDF::Predicates::RDF
in lib/MOBY/RDF/Predicates/RDF.pm
MOBY::RDF::Predicates::RDFS
in lib/MOBY/RDF/Predicates/RDFS.pm
MOBY::SOAP::Serializer
in lib/MOBY/SOAP/Serializer.pm
MOBY::dbConfig
in lib/MOBY/dbConfig.pm
MobyObjectClass
in lib/MOBY/lsid/authority/MobyMetadataResolver.pm
MobyServiceInstance
in lib/MOBY/lsid/authority/MobyMetadataResolver.pm
MobyServiceType
in lib/MOBY/lsid/authority/MobyMetadataResolver.pm
WSRF::BaseFaults
in lib/MOBY/Async/WSRF.pm
WSRF::FileBasedMobyResourceLifetimes
in lib/MOBY/Async/WSRF.pm
WSRF::FileBasedMobyResourceProperties
in lib/MOBY/Async/WSRF.pm
WSRF::FileLock
in lib/MOBY/Async/WSRF.pm
WSRF::Header
in lib/MOBY/Async/WSRF.pm
WSRF::MobyFile
in lib/MOBY/Async/WSRF.pm
WSRF::Serializer
in lib/MOBY/Async/WSRF.pm

Other files