Changes for version 1.01
- Fixed Build.PL to pick up correct location of bam header files.
- Eliminated several memory leaks that manifested when reading BAM files with lots of targets.
- Made -fasta argument optional when using high-level interface.
Modules
Add high-level methods to Bio::DB::Bam::Alignment
The SAM/BAM alignment object
Object passed to pileup() callback
Add high-level methods to Bio::DB::Bam::Pileup
Object representing the query portion of a BAM/SAM alignment
Read SAM/BAM database files
Constants for use with SAM/BAM
Provides
in lib/Bio/DB/Sam.pm
in lib/Bio/DB/Bam/FetchIterator.pm
in lib/Bio/DB/Bam/ReadIterator.pm
in lib/Bio/DB/Bam/AlignWrapper.pm
in lib/Bio/DB/Bam/Target.pm
in lib/Bio/DB/Sam.pm
in lib/Bio/DB/Sam/Segment.pm
in lib/Bio/DB/Sam.pm