bp_biogetseq - sequence retrieval using OBDA registry
This script retrieves sequences from the source defined by users registry setup. The current alternatives are from a local indexed file, sql database or over the web.
Usage: bp_biogetseq --dbname embl --format embl --namespace acc id [ ids... ] * dbname defaults to embl * format defaults to embl * namespace defaults to 'acc' ['id', 'acc', 'version'] * unnamed arguments are ids in the given namespace
To install BioPerl, copy and paste the appropriate command in to your terminal.
cpanm
cpanm BioPerl
CPAN shell
perl -MCPAN -e shell install BioPerl
For more information on module installation, please visit the detailed CPAN module installation guide.