- AUTHOR - Hilmar Lapp
Bio::Factory::FTLocationFactory - A FeatureTable Location Parser
# parse a string into a location object $loc = Bio::Factory::FTLocationFactory->from_string("join(100..200, 400..500");
Implementation of string-encoded location parsing for the Genbank feature table encoding of locations.
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AUTHOR - Hilmar Lapp
Email hlapp at gmx.net
Jason Stajich, jason-at-bioperl-dot-org Chris Fields, cjfields-at-uiuc-dot-edu
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : my $obj = Bio::Factory::FTLocationFactory->new(); Function: Builds a new Bio::Factory::FTLocationFactory object Returns : an instance of Bio::Factory::FTLocationFactory Args :
Title : from_string Usage : $loc = $locfactory->from_string("100..200"); Function: Parses the given string and returns a Bio::LocationI implementing object representing the location encoded by the string. This implementation parses the Genbank feature table encoding of locations. Example : Returns : A Bio::LocationI implementing object. Args : A string.
Title : _parse_location Usage : $loc = $locfactory->_parse_location( $loc_string) Function: Parses the given location string and returns a location object with start() and end() and strand() set appropriately. Note that this method is private. Returns : A Bio::LocationI implementing object or undef on failure Args : location string