Bio::Matrix::IO::phylip - A parser for PHYLIP distance matricies
my $parser = Bio::Matrix::IO->new(-format => 'phylip',
-file => 't/data/phylipdist.out');
my $matrix = $parser->next_matrix;
This is a parser for PHYLIP distance matrix output.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new
Usage : my $obj = Bio::Matrix::IO::phylip->new();
Function: Builds a new Bio::Matrix::IO::phylip object
Returns : an instance of Bio::Matrix::IO::phylip
Title : next_matrix
Usage : my $matrix = $parser->next_matrix
Function: Get the next result set from parser data
Returns : L<Bio::Matrix::PhylipDist>
Args : none
Title : write_matrix
Usage : $matio->write_matrix($matrix)
Function: Write out a matrix in the phylip distance format
Returns : none
Args : L<Bio::Matrix::PhylipDist>
To install BioPerl, copy and paste the appropriate command in to your terminal.
perl -MCPAN -e shell
For more information on module installation, please visit the detailed CPAN module installation guide.