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NAME

BioX::Map::CLIS::Cmd::Map - a wrapper for mapping software

VERSION

version 0.0.2

SYNOPSIS

  use BioX::Map::CLIS::Cmd::Map;
  BioX::Map::CLIS::Cmd::Map->new_with_cmd;

DESCRIPTION

  used to mapped a or more sample.

Attribute

infile

input file

outfile

outfile

indir

input dir that include multiple samples

outdir

output dir

process_tool

process number used by soap or bwa

process_sample

process number used when there are many samples

genome

path of genome file

tool

soap or bwa

execute

BUILDARGS

AUTHOR

Yan Xueqing <yanxueqing621@163.com>

COPYRIGHT AND LICENSE

This software is copyright (c) 2016 by Yan Xueqing.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.