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Bioinfo-0.1.6
River stage zero No dependents
++

Changes for version 0.1.6

  • Change: a04acd58160c8c99deec965394405f230b546bdd Author: Yan Xueqing <yanxueqing621@163.com> Date : 2017-08-19 23:36:40 +0000
    • Added batch splitsubmit2 module
  • Change: ae1f2c2bdb3b810479665c7386d321dcc8f34e59 Author: Yan Xueqing <yanxueqing621@163.com> Date : 2017-08-19 23:09:55 +0000
    • Fixed a minor error
  • Change: f90c923ae026168a98b63e4e499327236c99859b Author: Yan Xueqing <yanxueqing621@163.com> Date : 2017-08-19 14:45:46 +0000
    • Added \n to log file
  • Change: 95da271f0d1c3fcf8c2c95fdeb936b6c17ee8831 Author: Yan Xueqing <yanxueqing621@163.com> Date : 2017-08-19 14:45:00 +0000
    • Added result file of m8 format in ParseXML command

Documentation

biotools
a bioinformatics toolkit that I used often

Modules

Bioinfo
my perl module and CLIs for Biology
Bioinfo::App
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Blast
various operator related to Blast+
Bioinfo::App::Cmd::Blast::Cmd::ParseXML
parse XML file of blast+(with outfmt=5) into tabular format
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmit
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmitB2
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Fasta
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::Split
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::SplitBlast
my perl module and CLIs for Biology
Bioinfo::Fasta
get one or more sequences from a FASTA file quickly.
Bioinfo::PBS
my perl module and CLIs for Biology
Bioinfo::PBS::Queue
used to submit a batch of task to Torque cluster

Other files