NAME

Bio::MUST::Core::SeqMask - Sequence mask for selecting specific sites

VERSION

version 0.191300

SYNOPSIS

    # TODO

DESCRIPTION

    # TODO

METHODS

first_site

last_site

count_sites

coverage

empty_mask

custom_mask

mark_block

unmark_block

mask2blocks

blocks2mask

neutral_mask

variable_mask

parsimony_mask

ideal_mask

gblocks_mask

bmge_mask

and_mask

or_mask

negative_mask

filtered_ali

load

store

load_bor

store_bor

load_una

store_una

load_blocks

store_blocks

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

CONTRIBUTORS

  • Catherine COLSON <ccolson@doct.uliege.be>

  • Raphael LEONARD <rleonard@doct.uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.