- SEE ALSO
- AUTHOR - Aaron Mackey
Bio::Search::Hit::Fasta - Hit object specific for Fasta-generated hits
# You wouldn't normally create these manually; # instead they would be produced by Bio::SearchIO::fasta use Bio::Search::Hit::Fasta; my $hit = Bio::Search::Hit::Fasta->new(id=>'LBL_6321', desc=>'lipoprotein', e_val=>0.01);
Bio::Search::Hit::HitI objects are data structures that contain information about specific hits obtained during a library search. Some information will be algorithm-specific, but others will be generally defined, such as the ability to obtain alignment objects corresponding to each hit.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Function: where the heavy stuff will happen when new is called
Function: Provide getter/setters for ID,DESC,SIZE,INITN,INIT1,OPT,ZSC,E_VAL