compress-db.pl - Post-process assembler for transcript enrichment using 42
version 0.213470
compress.pl --config=<file> --indir=<dir> [optional arguments]
Path to YAML config file for 42.
config
Path to input tax-report files.
Overlap length cutoff for CAP3 (should be > 15) [default: 40].
Overlap percent identity cutoff for CAP3 (should be > 65) [default: 90].
Verbosity level for logging to STDERR [default: 0]. Available levels range from 0 to 6. Level 6 corresponds to debugging mode.
Print the usual program information
Denis BAURAIN <denis.baurain@uliege.be>
This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.
This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.
2 POD Errors
The following errors were encountered while parsing the POD:
'=item' outside of any '=over'
You forgot a '=back' before '=head1'
To install Bio::MUST::Apps::FortyTwo, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::MUST::Apps::FortyTwo
CPAN shell
perl -MCPAN -e shell install Bio::MUST::Apps::FortyTwo
For more information on module installation, please visit the detailed CPAN module installation guide.